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Tagged under "Ontology"
Term definition:
A formal model that allows knowledge to be represented for a specific domain. An ontology describes the types of things that exist (classes), the relationships between them (properties) and the logical ways those classes and properties can be used together (axioms).
Source: http://wiki.dublincore.org/index.php/NKOS_Vocabularies#KOS_Types_Vocabulary
Based on: W3C Linked Data Glossary. W3C Working Group Note 27 June 2013
Mapped URIs:
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Displaying 1 - 50 of 99 (includes those tagged under sub-topics)
AFEO
The Agri-Food Experiment Ontology (AFEO), a new ontology network was developed based on two existing ontology resources, i.e., OAE (Ontology for Agriculture Experiment) and OFPE (Ontology for Food...
In AgroPortal:
http://agroportal.lirmm.fr/ontologies/AFEO AEO
AEO is an ontology aimed to represent objects related to agricultural practices.
Publisher(s) / Maintainer(s):
Sungmin Joo
Hideaki Takeda
Daisuke Horyu
Takezaki Akane
Agriculture Activity Ontology(AAO) is the basis of the core vocabulary of agriculture activity, and it provides semantics for agricultural activity names. Also, AAO is formalized by Description...
AFO
Publisher(s) / Maintainer(s):
National Library of Finland
The Agriculture and Forestry Ontology AFO (ca. 6 000 concepts) is based on the Agriforest thesaurus maintained by the Viikki Campus Library, University of Helsinki. The combination of AFO and the...
GECO
Agroecology knowledge management is an application ontology for the description and organization of knowledge to design innovative crop systems. , Gestion des connaissances en agroécologie est une...
Publisher(s) / Maintainer(s):
Kuratorium für Technik und Bauwesen in der Landwirtschaft e. V. (KTBL)
agroXML is an XML dialect for representing and describing farm work. It provides elements and XML data types for representing data on work processes on the farm including accompanying operating...
ANAEETHES
The AnaEE thesaurus aims to provide a controlled vocabulary for the semantic description of the study of continental ecosystems and their biodiversity. It has been developed within the framework of...
ADO
The Animal Disease Ontology describes the characteristics and interrelations of production animals, diseases and their vectors. Regulatory statuses of diseases that are applicable in France and...
ATOL
The EOL ontology describes environmental conditions of livestock breeding. It includes feeding modalities, the structure of breeding systems and their environment
CO_125
Publisher(s) / Maintainer(s):
Bioversity International
Ontology of the Banana Anatomy
In AgroPortal:
http://agroportal.lirmm.fr/ontologies/CO_125 CO_325
Publisher(s) / Maintainer(s):
CGIAR
CGIAR banana ontology beta version.
BFO
BFO grows out of a philosophical orientation which overlaps with that of DOLCE and SUMO. Unlike these, however, it is narrowly focused on the task of providing a genuine upper ontology which can be...
Publisher(s) / Maintainer(s):
BBC
The Food Ontology is a simple lightweight ontology for publishing data about recipes, including the foods they are made from and the foods they create as well as the diets, menus, seasons, courses...
BAO
Publisher(s) / Maintainer(s):
National Centers for Biomedical Computing
The BioAssay Ontology (BAO) describes chemical biology screening assays and their results including high-throughput screening (HTS) data for the purpose of categorizing assays and data analysis. BAO...
BIOREFINERY
Publisher(s) / Maintainer(s):
Institut National de la Recherche Agronomique (INRA)
This vocabulary describes characterictics of biomass relevant for bio-refinery and unitary operations to transform a biomass in glucose.
BT
A top-domain ontology that provides definitions for the foundational entities of biomedicine as a basic vocabulary to unambiguously describe facts in this domain.
CL
Publisher(s) / Maintainer(s):
OBO Technical WG
The Cell Ontology is designed as a structured controlled vocabulary for cell types. This ontology was constructed for use by the model organism and other bioinformatics databases, where there is a...
CO_338
Publisher(s) / Maintainer(s):
CGIAR
CGIAR Chickpea Ontology beta version
CDAO
Publisher(s) / Maintainer(s):
CDAO team
A formalization of concepts and relations relevant to evolutionary comparative analysis, such as phylogenetic trees, OTUs (operational taxonomic units) and compared characters (including molecular...
Computex
Publisher(s) / Maintainer(s):
World Wide Web Foundation
Vocabulary for describing index structures and observations.
CO_705
Publisher(s) / Maintainer(s):
CGIAR
Describes official ISO 3166-1 alpha-2, alpha-3 and numeric country codes along with location names.
CO
Publisher(s) / Maintainer(s):
Generation Challenge Programme
Integrated Breeding Platform
The Crop Ontology project is the creation of the Generation Challenge Programme (GCP), which understood from its inception the importance of controlled vocabularies and ontologies for the digital...
Publisher(s) / Maintainer(s):
Sungmin Joo (NII)
Hideaki Takeda (NII)
Akane Takezaki (NARO)
Crop Vocabulary (CVO) is the core vocabulary of crop names to solve interoperability and machine-readability on crop names. Crop concepts in CVO are represented not only by organism names (“Cucumber...
CWR Ontology
Publisher(s) / Maintainer(s):
Food and Agriculture Organization of the United Nations (FAO)
The Ontology contains a subset of about 400 terms highly relevant to crop wild relatives. Terms with high relevance to CWR domain are grouped into themes, roughly corresponding to AGROVOC (top level...
DwC
Publisher(s) / Maintainer(s):
GBIF
Darwin Core (DwC) is a simple set of data element definitions designed to support the sharing and integration of primary biodiversity data. The DwC is a specification of data concepts and structure...
Publisher(s) / Maintainer(s):
OpenLink Software
DBpedia is a crowd-sourced community effort to extract structured information from Wikipedia and make this information available on the Web. DBpedia allows you to ask sophisticated queries against...
Publisher(s) / Maintainer(s):
DBpedia
DBpedia defines a number of properties to describe an entity of type "Food", "any eatable or drinkable substance that is normally consumed by humans".
DURUM_WHEAT
Publisher(s) / Maintainer(s):
Institut National de la Recherche Agronomique (INRA)
The durum wheat ontology (DURUM_WHEAT) is dedicated to the sustainability analysis of the durum wheat chain.Current data available on this ontology concern durum wheat quality criteria criteria used...
EDAM
Publisher(s) / Maintainer(s):
EDAM Core Developers
EDAM is an ontology of well established, familiar concepts that are prevalent within bioinformatics, including types of data and data identifiers, data formats, operations and topics. EDAM is a...
ENVO
Publisher(s) / Maintainer(s):
Envo Administrators
Wheat Data Interoperability Working Group
Ontology of environmental features and habitats
EOL
The EOL ontology describes environmental conditions of livestock breeding. It includes feeding modalities, the structure of breeding systems and their environment
EFO
Publisher(s) / Maintainer(s):
The European Bioinformatics Institute (EMBL-EBI)
The Experimental Factor Ontology (EFO) is an application focused ontology modelling the experimental variables in multiple resources at the EBI and the Centre for Therapeutic Target Validation. The...
CO_020
Publisher(s) / Maintainer(s):
Food and Agriculture Organization of the United Nations (FAO)
Bioversity International
FAO/IPGRI Multi-Crop Passport Descriptor formalized as an ontology. Adapted from FAO/Bioversity Multi-Crop Passport Descriptors, December 2015
FALDO
FALDO is the Feature Annotation Location Description Ontology. It is a simple ontology to describe sequence feature positions and regions as found in GFF3, DBBJ, EMBL, GenBank files, UniProt, and...
Publisher(s) / Maintainer(s):
ITMO University
A common ontology, vocabulary or language for the food product domain that aims to help the manufactures, retailers, governments and institutions to publish their data related to this domain in a way...
Some relations
GoodRelations
FOODIE
Publisher(s) / Maintainer(s):
FOODIE consortium
The FOODIE ontology, developed in the FOODIE EC-funed project, extends INSPIRE data model for Agriculture and Aquaculture Facilities theme. FOODIE ontology has been generated from FOODIE application...
FOODON
FOODON is a new ontology built to interoperate with the OBO Library and to represent entities which bear a “food role”. It encompasses materials in natural ecosystems and food webs as well as human-...
CROPUSAGE
Publisher(s) / Maintainer(s):
Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture (IRSTEA)
A thesaurus about crops cultivated in France. The hierarchy is based on the final destination of the crop (human food, animal breeding, food industry) and the cultivated system. The hierachy is not...
GO
Publisher(s) / Maintainer(s):
The Gene Ontology Consortium
Direct support for the Gene Ontology Consortium is provided by an R01 grant from the National Human Genome Research Institute (NHGRI) [grant HG02273]; AstraZeneca; Incyte Genomics; the European Union...
In AgroPortal:
http://agroportal.lirmm.fr/ontologies/GO GENO
It is a representation of the taxonomy tree in the ontology format. Each term in this ontology can represent subspecies, species, genus, order, class or any rank in the classification. Primarily...
GFVO
Publisher(s) / Maintainer(s):
CODAMONO
The Genomic Feature and Variation Ontology (GFVO) is modeled to represent genomic data using the Resource Description Format (RDF) or Linked Data using JSON (JSON-LD). It is captures the contents of...
Publisher(s) / Maintainer(s):
Food and Agriculture Organization of the United Nations (FAO)
Geopolitical ontology The FAO geopolitical ontology and related services have been developed to facilitate data exchange and sharing in a standardized manner among systems managing information about...
GR-TAX
Publisher(s) / Maintainer(s):
Gramene
It is a representation of the taxonomy tree in the ontology format. Each term in this ontology can represent subspecies, species, genus, order, class or any rank in the classification. Primarily...
CO_337
Publisher(s) / Maintainer(s):
CGIAR
International Crops Research Institute for the Semi-Arid Tropics (ICRISAT)
CGIAR Groundnut Ontology beta version
CO_334
CGIAR Cassava Ontology
CO_340
Cowpea Trait Ontology
CO_715
Publisher(s) / Maintainer(s):
CGIAR
Bioversity International
International Maize and Wheat Improvement Center (CIMMYT)
Describes experimental design, environmental conditions and methods associated with the crop study/experiment/trail and their evaluation.
CO_320
Publisher(s) / Maintainer(s):
CGIAR
International Rice Research Institute (IRRI)
CGIAR rice trait ontology version 3. Compared with IRRI SES and trait ontology. Based from SES, Rice Descriptor and IRIS DB.
CO_121
Publisher(s) / Maintainer(s):
CGIAR
Defines growth stages of wheat
CO_321
Publisher(s) / Maintainer(s):
CGIAR
International Maize and Wheat Improvement Center (CIMMYT)
CIMMYT - Wheat - February 2016