OWL XML is defined by the “OWL 2 Web Ontology Language, XML Serialization” W3C Recommendation. It has a media type: ‘application/owl+xml’ and a preferred suffix: ‘.owx’.
The Agri-Food Experiment Ontology (AFEO), a new ontology network was developed based on two existing ontology resources, i.e., OAE (Ontology for Agriculture Experiment) and OFPE (Ontology for Food...
Agroecology knowledge management is an application ontology for the description and organization of knowledge to design innovative crop systems. , Gestion des connaissances en agroécologie est une...
The AnaEE thesaurus aims to provide a controlled vocabulary for the semantic description of the study of continental ecosystems and their biodiversity. It has been developed within the framework of...
The EOL ontology describes environmental conditions of livestock breeding. It includes feeding modalities, the structure of breeding systems and their environment
BFO grows out of a philosophical orientation which overlaps with that of DOLCE and SUMO. Unlike these, however, it is narrowly focused on the task of providing a genuine upper ontology which can be...
The BioAssay Ontology (BAO) describes chemical biology screening assays and their results including high-throughput screening (HTS) data for the purpose of categorizing assays and data analysis. BAO...
A top-domain ontology that provides definitions for the foundational entities of biomedicine as a basic vocabulary to unambiguously describe facts in this domain.
A formalization of concepts and relations relevant to evolutionary comparative analysis, such as phylogenetic trees, OTUs (operational taxonomic units) and compared characters (including molecular...
Institut National de la Recherche Agronomique (INRA)
The durum wheat ontology (DURUM_WHEAT) is dedicated to the sustainability analysis of the durum wheat chain.Current data available on this ontology concern durum wheat quality criteria criteria used...
The EOL ontology describes environmental conditions of livestock breeding. It includes feeding modalities, the structure of breeding systems and their environment
The Experimental Factor Ontology (EFO) is an application focused ontology modelling the experimental variables in multiple resources at the EBI and the Centre for Therapeutic Target Validation. The...
FALDO is the Feature Annotation Location Description Ontology. It is a simple ontology to describe sequence feature positions and regions as found in GFF3, DBBJ, EMBL, GenBank files, UniProt, and...
A common ontology, vocabulary or language for the food product domain that aims to help the manufactures, retailers, governments and institutions to publish their data related to this domain in a way...
FOODON is a new ontology built to interoperate with the OBO Library and to represent entities which bear a “food role”. It encompasses materials in natural ecosystems and food webs as well as human-...
It is a representation of the taxonomy tree in the ontology format. Each term in this ontology can represent subspecies, species, genus, order, class or any rank in the classification. Primarily...
The Genomic Feature and Variation Ontology (GFVO) is modeled to represent genomic data using the Resource Description Format (RDF) or Linked Data using JSON (JSON-LD). It is captures the contents of...
international Food Policy Research Institute (IFPRI)
The Agricultural and Nutrition Technology Ontology (ANT) was developed by the CGIAR to make it easier for organizations to access information on tested technologies that can improve smallholder...
The Multi-scale Multi-step ontology (MS²O) is an ontology to describe transformation processes., Multi-scale Multi-step ontology (MS²O) est une ontologie permettant de décrire des processus de...
The Plant Environment Ontology describes the treatments,growing conditions, and/or study types used in various types of plant biology experiments. The subjects of the studies may also include in...
A non extensive collection of terms that describe structure and developmental stages of a plant. Arranged in a structured order/network based on the biological concept describing the term's...
Domain ONtology for Phenotyping Experiments. Synchronized wih the Breeding API ( http://docs.brapi.apiary.io ) and MIAPPE compliant ( https://biosharing.org/bsg-000543 )
A controlled vocabulary to describe phenotypic traits in plants. Each trait is a distinguishable feature, characteristic, quality or phenotypic feature of a developing or mature plant, or a plant...
The Population and Community Ontology (PCO) models material entities, qualities, and processes related to collections of interacting organisms such as populations and communities. It is taxon neutral...
PRO provides an ontological representation of protein-related entities by explicitly defining them and showing the relationships between them. Each PRO term represents a distinct class of entities (...
SO is a collaborative ontology project for the definition of sequence features used in biological sequence annotation. SO was initially developed by the Gene Ontology Consortium. Contributors to SO...
SNP-Ontology is a domain ontology that provides a formal representation (OWL-DL) of genomic variations. Despite its name, SNP-Ontology, is not limited to the representation of SNPs but it encompasses...
The SmartProducts Network of Ontologies (SPO) provides a clear specification of the conceptual model underlying the work on the SmartProducts project, and maximises interoperability not just among...
The SDGIO aims to provide a semantic bridge between 1) the Sustainable Development Goals, their targets, and indicators and 2) the large array of entities they refer to. It imports classes from...