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Tagged under "OBO Flat File"
CO_125
Publisher(s) / Maintainer(s):
Bioversity International
Ontology of the Banana Anatomy
In AgroPortal:
http://agroportal.lirmm.fr/ontologies/CO_125 CO_325
Publisher(s) / Maintainer(s):
CGIAR
CGIAR banana ontology beta version.
CL
Publisher(s) / Maintainer(s):
OBO Technical WG
The Cell Ontology is designed as a structured controlled vocabulary for cell types. This ontology was constructed for use by the model organism and other bioinformatics databases, where there is a...
CO_705
Publisher(s) / Maintainer(s):
CGIAR
Describes official ISO 3166-1 alpha-2, alpha-3 and numeric country codes along with location names.
ENVO
Publisher(s) / Maintainer(s):
Envo Administrators
Wheat Data Interoperability Working Group
Ontology of environmental features and habitats
CO_020
Publisher(s) / Maintainer(s):
Food and Agriculture Organization of the United Nations (FAO)
Bioversity International
FAO/IPGRI Multi-Crop Passport Descriptor formalized as an ontology. Adapted from FAO/Bioversity Multi-Crop Passport Descriptors, December 2015
FOODON
FOODON is a new ontology built to interoperate with the OBO Library and to represent entities which bear a “food role”. It encompasses materials in natural ecosystems and food webs as well as human-...
GO
Publisher(s) / Maintainer(s):
The Gene Ontology Consortium
Direct support for the Gene Ontology Consortium is provided by an R01 grant from the National Human Genome Research Institute (NHGRI) [grant HG02273]; AstraZeneca; Incyte Genomics; the European Union...
In AgroPortal:
http://agroportal.lirmm.fr/ontologies/GO GR-TAX
Publisher(s) / Maintainer(s):
Gramene
It is a representation of the taxonomy tree in the ontology format. Each term in this ontology can represent subspecies, species, genus, order, class or any rank in the classification. Primarily...
CO_715
Publisher(s) / Maintainer(s):
CGIAR
Bioversity International
International Maize and Wheat Improvement Center (CIMMYT)
Describes experimental design, environmental conditions and methods associated with the crop study/experiment/trail and their evaluation.
CO_121
Publisher(s) / Maintainer(s):
CGIAR
Defines growth stages of wheat
ONTOBIOTOPE
Publisher(s) / Maintainer(s):
Institut National de la Recherche Agronomique (INRA)
The OntoBiotope Ontology describes all types of microorganism biotopes.
PATO
Publisher(s) / Maintainer(s):
OBO Technical WG
Phenotypic qualities (properties). This ontology can be used in conjunction with other ontologies such as GO or anatomical ontologies to refer to phenotypes. Examples of qualities are red, ectopic,...
PR
Publisher(s) / Maintainer(s):
Protein Ontology Consortium
PRO provides an ontological representation of protein-related entities by explicitly defining them and showing the relationships between them. Each PRO term represents a distinct class of entities (...
TRIPHASE
Publisher(s) / Maintainer(s):
Institut National de la Recherche Agronomique (INRA)
TriPhase is a large thesaurus in the domain of animal physiology and livestock designed by INRA.
An integrated cross-species anatomy ontology covering animals and bridging multiple species-specific ontologies
VARIO
Publisher(s) / Maintainer(s):
Mauno Vihinen
Variation Ontology, VariO, is an ontology for standardized, systematic description of effects, consequences and mechanisms of variations.
WHEATPHENOTYPE
Publisher(s) / Maintainer(s):
Institut National de la Recherche Agronomique (INRA)
WheatPhenotype is an ontology of wheat traits and environmental factors that affect these traits. They include resistance to disease, development nutrition, bread quality, etc. Environmental factors...
XEO
XeO has been created to help plant scientists in documenting and sharing metadata describing the abiotic environment.