PLEASE HELP US BY COMPLETING  A QUICK SURVEY ON THE USE OF THIS MAP: click here

Tagged under "Organisms"

Term definition: 
Any scientific taxonomy of organisms.
Mapped URIs: 
http://aims.fao.org/aos/agrovoc/c_49904
http://aims.fao.org/aos/agrovoc/c_7631
Go back to full list

Displaying 1 - 8 of 8 (includes those tagged under sub-topics)

BCH Controlled vocabulary and Thesaurus

Publisher(s) / Maintainer(s): 
United Nations Environment Programme (UNEP)
The BCH Thesaurus provides a pre-defined list of terms, related synonyms and translations used in the specific context of records registered with the Biosafety Clearing-House. It establishes the...
http://bch.cbd.int/resources/thesaurus/

Some relations

AGROVOC Multilingual agricultural thesaurus
CABI codes
Cartagena Protocol on Biosafety
ThesaurusOrganismsStructural and Functional GenomicResearch and agronomic data

Darwin Core (1.0 and 2.0)

Publisher(s) / Maintainer(s): 
GBIF
Darwin Core (DwC) is a simple set of data element definitions designed to support the sharing and integration of primary biodiversity data. The DwC is a specification of data concepts and structure...
http://rs.tdwg.org/dwc/
https://github.com/tdwg/dwc
Schema / element setResearch and agronomic dataPlants / germplasmGeneral Germplasm

Gramene Taxonomy Ontology

Publisher(s) / Maintainer(s): 
Gramene
It is a representation of the taxonomy tree in the ontology format. Each term in this ontology can represent subspecies, species, genus, order, class or any rank in the classification. Primarily...
http://www.gramene.org/
In AgroPortal: 
http://agroportal.lirmm.fr/ontologies/GR-TAX

Some relations

Environment Ontology
Experimental Factor Ontology
National Center for Biotechnology Information (NCBI) Organismal Classification
Ontology

International Code of Nomenclature for algae, fungi, and plants (Melbourne Code)

Publisher(s) / Maintainer(s): 
International Association for Plant Taxonomy
The Melbourne Code contains agreed rules on the nomenclature of organisms. Electronic version of the original English text, adopted by the Seventeenth International Botanical Congress. Vienna,...
http://www.iapt-taxon.org/nomen/main.php
TaxonomyOrganismsResearch and agronomic data

National Center for Biotechnology Information (NCBI) Organismal Classification

Publisher(s) / Maintainer(s): 
National Center for Biotechnology Information (NCBI)
The NCBI Taxonomy Database is a curated classification and nomenclature for all of the organisms in the public sequence databases.
https://www.ncbi.nlm.nih.gov/
In AgroPortal: 
http://agroportal.lirmm.fr/ontologies/NCBITAXON

Some relations

Cell Ontology
Country and Location
BioTop Ontology
Ontology

Population and Community Ontology

The Population and Community Ontology (PCO) models material entities, qualities, and processes related to collections of interacting organisms such as populations and communities. It is taxon neutral...
https://github.com/PopulationAndCommunityOntology/pco
In AgroPortal: 
http://agroportal.lirmm.fr/ontologies/PCO

Some relations

Environment Ontology
Experimental Factor Ontology
FAO-IPGRI Multi-Crop Passport Ontology
OntologyBiodiversity and ecological dataNatural Resources, Earth and Environment data

Uberon multi-species anatomy ontology

An integrated cross-species anatomy ontology covering animals and bridging multiple species-specific ontologies
http://www.obofoundry.org/ontology/uberon
OntologyLivestock research dataOrganismsResearch and agronomic data

UniProt Taxonomy

Publisher(s) / Maintainer(s): 
UniProt consortium
Organisms are classified in a hierarchical tree structure. UniProt taxonomy database contains every node (taxon) of the tree. UniProtKB taxonomy data is manually curated: next to manually verified...
http://www.uniprot.org/taxonomy/
TaxonomyOrganismsResearch and agronomic data