Soy Ontology | Agrisemantics Map of Data Standards

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Soybean Growth and Trait Ontology

Form

Core information

URL(s):

https://www.soybase.org/

Domain(s):

Plant Science and Plant Products

Type of standard:

Ontology

Describes / models / annotates:

Phenotype and Trait, Plants / germplasm, Research and agronomic data

Segment of the value chain:

Research

Additional information

Acronym:

SOY

Contact email:

Rex.Nelson@ARS.USDA.GOV

Technical information

Format of the data standard:

OWL/XML

Namespace:

http://purl.obolibrary.org/obo/TEMP

Download / dump:

http://data.agroportal.lirmm.fr/ontologies/SOY/submissions/1/download?apikey=1de...

Link to machine-readable description:

https://soybase.org/downloads/SoyOntology/SoyOntology.Current.obo

RDF vocabulary

RDF "language":

OWL

Number of classes:

2213

Number of properties:

VEST / AgroPortal integration

Original source:

AgroPortal

Agroportal URI:

http://data.agroportal.lirmm.fr/ontologies/SOY

Agroportal Web page:

http://agroportal.lirmm.fr/ontologies/SOY

Assessment

An overview of criteria used for the assessment can be found here.

Total score:

1.33

assessment tabs

Fitness / adoption

Complete:

Not clear - N/A

Authoritative:

Not clear - N/A

Largely compatible:

Not clear - N/A

Known:

Not clear - N/A

Used in software:

Not clear - N/A

Used in datasets:

Not clear - N/A

Discoverable:

Yes

Regulatory:

Not clear - N/A

Endorsed:

Not clear - N/A

Long-term, sustainable:

Not clear - N/A

Participatory, collaborative:

Not clear - N/A

Maintained:

Yes

Scores

Avg fitness:

1.00

Avg adoption:

1.44

Usability / openness

Available on the web:

Yes

Versatile:

Yes, 2-3 similar formats

Served by APIs:

Not clear - N/A

Yes, to automatically annotate text or data

Manageable:

Not clear - N/A

Documented:

Not clear - N/A

Supported:

Not clear - N/A

Testable:

Not clear - N/A

Machine-readable:

Not clear - N/A

Meaningful:

Not clear - N/A

Annotated:

Not clear - N/A

Linked:

Not clear - N/A

Clearly licensed:

Not clear - N/A

Openly licensed:

Not clear - N/A

Scores

Avg usability:

2.00

Avg openness:

0.86

URI: https://vest.agrisemantics.org/node/20076

RDF

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