Linked life data | Agrisemantics Map of Data Standards

Linked Life Data (LLD) is a data-as-a-service platform that provides access to 25 public biomedical databases through a single access point. The service allows writing of complex data analytical queries, answering complex bioinformatics questions such as 'give me all human genes located in Y-chromosome with the known molecular interactions'; simply navigate through the information, or export subsets like 'all approved drugs and their brand names'. The service offers two different access levels:LLD Public - completely free anonymous access for developing proof-of-concept applications with no hosting and data setup costs. LLD Enterprise - premium service access for matured applications, which guarantees extra features.

Form

Core information

URL(s):

http://linkedlifedata.com/

Publisher(s) / Maintainer(s):

partially funded by Linked Life Data and the EU IST projects, KHRESMOI (FP7-257528) and LarKC (FP7-215535)

Type of standard:

Encyclopedia

Additional information

Contact email:

life-sciences@ontotext.com

Publication year:

2014

License(s):

CC0 Public Domain Dedication

Technical information

Format of the data standard:

N-Triples, RDF/XML, Turtle

RDF vocabulary

RDF "language":

OBO

OWL

SKOS

SPARQL Endpoint:

http://linkedlifedata.com/sparql

VEST / AgroPortal integration

Original source:

VEST Registry

Assessment

An overview of criteria used for the assessment can be found here.

Total score:

1.68

assessment tabs

Fitness / adoption

Complete:

Not clear - N/A

Authoritative:

Not clear - N/A

Largely compatible:

Not clear - N/A

Known:

Not clear - N/A

Used in software:

Not clear - N/A

Used in datasets:

Not clear - N/A

Discoverable:

Not clear - N/A

Regulatory:

Not clear - N/A

Endorsed:

Not clear - N/A

Long-term, sustainable:

Not clear - N/A

Participatory, collaborative:

Not clear - N/A

Maintained:

Not clear - N/A

Scores

Avg fitness:

1.00

Avg adoption:

1.00

Usability / openness

Available on the web:

Yes

Versatile:

Yes, many formats

Served by APIs:

Yes, to perform cross-walks between vocabularies

Manageable:

Not clear - N/A

Documented:

Yes

Supported:

Not clear - N/A

Testable:

Machine-readable:

Yes

Meaningful:

Yes

Annotated:

Not clear - N/A

Referenceable:

Yes

Linked:

Yes

Clearly licensed:

Yes

Openly licensed:

Scores

Avg usability:

2.43

Avg openness:

2.29

Notes on assessment:

First technical assessment (usability / openness) made by: Agroknow.

URI: https://vest.agrisemantics.org/node/18692

RDF

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