Tagged under "Plants / germplasm"

Term definition: 
Data on plants and crops, which may include repository information, cultivars, landraces, farmers' varieties, breeding lines, accessions, genetic stocks and other related material. May also relate to non-cultivated flora and fauna, such as invasive or threatened species.
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Displaying 1 - 50 of 70 (includes those tagged under sub-topics)

The Access to Biological Collections Data (ABCD) Schema is an evolving comprehensive standard for the access to and exchange of data about specimens and observations (a.k.a. primary biodiversity data...
Publisher(s) / Maintainer(s): 
Agricultural Model Intercomparison and Improvement Project (AgMIP)
Format used by AgMIP models: data are transferred into and out of the ACE and ACMO databases through the API using JSON objects, which consist of key:value pairs. Each key in a key:value pair...
The Agri-Food Experiment Ontology (AFEO), a new ontology network was developed based on two existing ontology resources, i.e., OAE (Ontology for Agriculture Experiment) and OFPE (Ontology for Food...
Agroecology knowledge management is an application ontology for the description and organization of knowledge to design innovative crop systems. , Gestion des connaissances en agroécologie est une...
The AnaEE thesaurus aims to provide a controlled vocabulary for the semantic description of the study of continental ecosystems and their biodiversity. It has been developed within the framework of...
The EOL ontology describes environmental conditions of livestock breeding. It includes feeding modalities, the structure of breeding systems and their environment
Publisher(s) / Maintainer(s): 
Bioversity International
Ontology of the Banana Anatomy
BFO grows out of a philosophical orientation which overlaps with that of DOLCE and SUMO. Unlike these, however, it is narrowly focused on the task of providing a genuine upper ontology which can be...
Publisher(s) / Maintainer(s): 
United Nations Environment Programme (UNEP)
The BCH Thesaurus provides a pre-defined list of terms, related synonyms and translations used in the specific context of records registered with the Biosafety Clearing-House. It establishes the...
Publisher(s) / Maintainer(s): 
National Centers for Biomedical Computing
The BioAssay Ontology (BAO) describes chemical biology screening assays and their results including high-throughput screening (HTS) data for the purpose of categorizing assays and data analysis. BAO...
Publisher(s) / Maintainer(s): 
CDAO team
A formalization of concepts and relations relevant to evolutionary comparative analysis, such as phylogenetic trees, OTUs (operational taxonomic units) and compared characters (including molecular...
Publisher(s) / Maintainer(s): 
Convention of Biological Diversity
"It facilitates searching and retrieving information by linking similar documents and on-line resources with unique terms. It standardizes descriptions, and so assists in efforts to make information...
Publisher(s) / Maintainer(s): 
Bioversity International
The core descriptors for in situ conservation of Crop Wild Relatives are designed to facilitate the compilation and exchange of data, which are needed to develop and implement in situ conservation...
Publisher(s) / Maintainer(s): 
Generation Challenge Programme
Integrated Breeding Platform
The Crop Ontology project is the creation of the Generation Challenge Programme (GCP), which understood from its inception the importance of controlled vocabularies and ontologies for the digital...
Publisher(s) / Maintainer(s): 
Food and Agriculture Organization of the United Nations (FAO)
The Ontology contains a subset of about 400 terms highly relevant to crop wild relatives. Terms with high relevance to CWR domain are grouped into themes, roughly corresponding to AGROVOC (top level...
Publisher(s) / Maintainer(s): 
GBIF
Darwin Core (DwC) is a simple set of data element definitions designed to support the sharing and integration of primary biodiversity data. The DwC is a specification of data concepts and structure...
Publisher(s) / Maintainer(s): 
Institut National de la Recherche Agronomique (INRA)
The durum wheat ontology (DURUM_WHEAT) is dedicated to the sustainability analysis of the durum wheat chain.Current data available on this ontology concern durum wheat quality criteria criteria used...
Publisher(s) / Maintainer(s): 
National Centers for Biomedical Computing
The Encyclopedia of Life is an ecosystem of Web sites that makes all key information about all life on Earth freely accessible. The portal contains about 25 exemplar species pages and tens of...
The EOL ontology describes environmental conditions of livestock breeding. It includes feeding modalities, the structure of breeding systems and their environment
Publisher(s) / Maintainer(s): 
Food and Agriculture Organization of the United Nations (FAO)
Bioversity International
FAO/IPGRI Multi-Crop Passport Descriptor formalized as an ontology. Adapted from FAO/Bioversity Multi-Crop Passport Descriptors, December 2015
Publisher(s) / Maintainer(s): 
Food and Agriculture Organization of the United Nations (FAO)
Bioversity International
The FAO/Bioversity Multi-Crop Passport Descriptors (MCPD V.2) is the result of a thorough revision of the publication originally released by FAO/IPGRI in 2001, which has been widely used as the...
Publisher(s) / Maintainer(s): 
Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture (IRSTEA)
A thesaurus about crops cultivated in France. The hierarchy is based on the final destination of the crop (human food, animal breeding, food industry) and the cultivated system. The hierachy is not...
Publisher(s) / Maintainer(s): 
The Gene Ontology Consortium
Direct support for the Gene Ontology Consortium is provided by an R01 grant from the National Human Genome Research Institute (NHGRI) [grant HG02273]; AstraZeneca; Incyte Genomics; the European Union...
It is a representation of the taxonomy tree in the ontology format. Each term in this ontology can represent subspecies, species, genus, order, class or any rank in the classification. Primarily...
Publisher(s) / Maintainer(s): 
IOPI
Up to now, records from 6 major floristic datasets have been imported, as well as 7 specialized family datasets. With a total of 248400 source records, the GPC now covers 201,397 different plant...
Publisher(s) / Maintainer(s): 
United States Department of Agriculture (USDA)
USDA manages the Germplasm Resources Information Network (GRIN): GRIN taxonomic data provide the structure and nomenclature for the accessions in the system. In GRIN Taxonomy all families and genera...
Publisher(s) / Maintainer(s): 
CGIAR
International Crops Research Institute for the Semi-Arid Tropics (ICRISAT)
CGIAR Groundnut Ontology beta version
Publisher(s) / Maintainer(s): 
CGIAR
Bioversity International
International Maize and Wheat Improvement Center (CIMMYT)
Describes experimental design, environmental conditions and methods associated with the crop study/experiment/trail and their evaluation.
Publisher(s) / Maintainer(s): 
CGIAR
International Rice Research Institute (IRRI)
CGIAR rice trait ontology version 3. Compared with IRRI SES and trait ontology. Based from SES, Rice Descriptor and IRIS DB.
Publisher(s) / Maintainer(s): 
CGIAR
International Maize and Wheat Improvement Center (CIMMYT)
CIMMYT - Wheat - February 2016
Publisher(s) / Maintainer(s): 
international Food Policy Research Institute (IFPRI)
The Agricultural and Nutrition Technology Ontology (ANT) was developed by the CGIAR to make it easier for organizations to access information on tested technologies that can improve smallholder...
Publisher(s) / Maintainer(s): 
Integrated Taxonomic Information System
The ITIS includes documented taxonomic information of flora and fauna from both aquatic and terrestrial habitats. It contains information on plants, animals, fungi, and microbes of North America and...
Publisher(s) / Maintainer(s): 
National Agriculture Library
International Rice Research Institute (IRRI)
The thesaurus is a joint project of the IRRI Library and Documentation Service (LDS) and the Communication and Publications Services (CPS). It aims to make available standard terms used in rice...
Publisher(s) / Maintainer(s): 
U.S. National Library of Medicine
MeSH is the National Library of Medicine's controlled vocabulary thesaurus. It consists of sets of terms naming descriptors in a hierarchical structure that permits searching at various levels of...
The Multi-scale Multi-step ontology (MS²O) is an ontology to describe transformation processes., Multi-scale Multi-step ontology (MS²O) est une ontologie permettant de décrire des processus de...
TyDISourceDB=termino.tdy_ontobiotope2013 / TyDIProjectId=23260
INRA MISTEA, SPO, IATE Copyright © - INRA - 2014 - 2016 The Ontology for Agricultural Experiments is licensed by CC 4.0 ( http://creativecommons.org/licenses/by/4.0/legalcode ), OFPE is a generic...